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GrainGenes Marker Report: k07988

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Locus	k07988
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 146.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS27C22
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = GTTACAACTCRGTTCAATTCC Parent 1 SNP sequence = GTTACAACTCGGTTCAATTCC Parent 2 SNP sequence = GTTACAACTCAGTTCAATTCC
Probe for Locus	BaGS27C22
Locus	k07988
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBb0003A12.4 [Oryza sativa (japonica cultivar-group)] emb CAD39469.2 OSJNBa0001M07.6 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CTGAACCCAAACCCAGATGT Right 5' - CAGAGAAGGAGGCTCACCAG
Sequence	BJ465760
PCR size	261