Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k08297

[Submit comment/correction]

Locus	k08297
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 112.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS14A02
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = AATGTAAACCRCAGGCTGCTT Parent 1 SNP sequence = AATGTAAACCGCAGGCTGCTT Parent 2 SNP sequence = AATGTAAACCACAGGCTGCTT
Probe for Locus	BaGS14A02
Locus	k08297
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBb0040D15.1 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CCCATGGCAAACAAACTCTT Right 5' - GAAGGACTACAAGGACGGCA
Sequence	AV834315
PCR size	411