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GrainGenes Marker Report: k08802

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Locus	k08802
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 104.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH19C21
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = CACAATGATGYGATCTGCTAA Parent 1 SNP sequence = CACAATGATGTGATCTGCTAA Parent 2 SNP sequence = CACAATGATGCGATCTGCTAA
Probe for Locus	BaH19C21
Locus	k08802
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = FYVE finger-containing phosphoinositide kinase-like [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - ATAGCCCATGACTGGAATGC Right 5' - CGCAACCCAAACCTGTAGAT
Sequence	AV835763
PCR size	261