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GrainGenes Marker Report: k08808

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Locus	k08808
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 168.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH28G01
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/A SNP structure (UNICODE) = CGTAGTCTTCMGGTGTTAGTG Parent 1 SNP sequence = CGTAGTCTTCCGGTGTTAGTG Parent 2 SNP sequence = CGTAGTCTTCAGGTGTTAGTG
Probe for Locus	BaH28G01
Locus	k08808
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0038O10.19 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CAGTCGTCACTCGTCAGTGG Right 5' - GAGGCCATCCACTCCTACAC
Sequence	AV835991
PCR size	277