Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k08843

[Submit comment/correction]

Locus	k08843
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 271.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH18D15
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/G SNP structure (UNICODE) = AGAAGAGATCRTTCGCCGCCA Parent 1 SNP sequence = AGAAGAGATCATTCGCCGCCA Parent 2 SNP sequence = AGAAGAGATCGTTCGCCGCCA
Probe for Locus	BaH18D15
Locus	k08843
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = heat stress transcription factor Spl7 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CAGTTAACAACGAGCGACGA Right 5' - GACGGGTCTAAAAGCATGGA
PCR size	273