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GrainGenes Marker Report: k09083

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Locus	k09083
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 75.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH50E09
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = AATTATTTATYTACGAGAGAT Parent 1 SNP sequence = AATTATTTATCTACGAGAGAT Parent 2 SNP sequence = AATTATTTATTTACGAGAGAT
Probe for Locus	BaH50E09
Locus	k09083
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = Stromal 70 kDa heat shock-related protein, chloroplast precursor pir S32818 dnaK-type molecular chaperone CSS1 precursor, chloroplast - gar
Type	PCR
PCR primers	Left 5' - CACGACATCAGAGGGACCTT Right 5' - GTTTTGGGAACACGATCTGC
Sequence	AV937418
PCR size	250