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GrainGenes Marker Report: k09127

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Locus	k09127
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 76
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH50J11
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/A SNP structure (UNICODE) = ATATTTTCCAMTATGTGTTAT Parent 1 SNP sequence = ATATTTTCCACTATGTGTTAT Parent 2 SNP sequence = ATATTTTCCAATATGTGTTAT
Probe for Locus	BaH50J11
Locus	k09127
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = pyridoxal kinase-like protein SOS4 [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - CGTTGCGGAACACTGTAGAA Right 5' - AACTACGAGGCCAAGCTGAA
PCR size	192