Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k09142

[Submit comment/correction]

Locus	k09142
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 103.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH19A05
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = CAAGAGAAAARGATCATGTGG Parent 1 SNP sequence = CAAGAGAAAAGGATCATGTGG Parent 2 SNP sequence = CAAGAGAAAAAGATCATGTGG
Probe for Locus	BaH19A05
Locus	k09142
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = B1088C09.1 [Oryza sativa (japonica cultivar-group)] dbj BAB68096.1 B1088C09.1 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - GGCTGATCGTTGTCATCCTT Right 5' - GATTTGCTTCCCGTGAATGT
Sequence	AV935541
PCR size	250