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GrainGenes Marker Report: k09213

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Locus	k09213
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 128.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH23N06
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = AGATGGAGGCYAGCAGCACGG Parent 1 SNP sequence = AGATGGAGGCCAGCAGCACGG Parent 2 SNP sequence = AGATGGAGGCTAGCAGCACGG
Probe for Locus	BaH23N06
Locus	k09213
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = cellulose synthase [Populus tremuloides]
Type	PCR
PCR primers	Left 5' - CTTGCAAAGAATGGCCTAGC Right 5' - GAAAACATGCCAGGAAGGAC
Sequence	AV944896
PCR size	413