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GrainGenes Marker Report: k09214

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Locus	k09214
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 288.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH53B15
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = ATTGCCAGAGRCAGAAATGCA Parent 1 SNP sequence = ATTGCCAGAGGCAGAAATGCA Parent 2 SNP sequence = ATTGCCAGAGACAGAAATGCA
Probe for Locus	BaH53B15
Locus	k09214
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative glutathione S-transferase OsGSTT1 [Oryza sativa subsp. japonica]
Type	PCR
PCR primers	Left 5' - CAGCAAGTACCGCAAGATGA Right 5' - TCCTCCAAGGTGAGGATCTG
Sequence	BJ552433
PCR size	415