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GrainGenes Marker Report: k09229

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Locus	k09229
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 129.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH41G07
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = CTTCTTCCCCYACATCTGCAT Parent 1 SNP sequence = CTTCTTCCCCCACATCTGCAT Parent 2 SNP sequence = CTTCTTCCCCTACATCTGCAT
Probe for Locus	BaH41G07
Locus	k09229
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0439E07.6 [Oryza sativa (japonica cultivar-group)] dbj BAB91925.1 P0439E07.6 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TGATCGGATCCTTTGGACAT Right 5' - GGACACGACCTTGATCACCT
Sequence	BJ482781
PCR size	398