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GrainGenes Marker Report: k09384

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Locus	k09384
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 144.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH50N19
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/G SNP structure (UNICODE) = ACGGCGCCGAKAGGGCGGAGA Parent 1 SNP sequence = ACGGCGCCGATAGGGCGGAGA Parent 2 SNP sequence = ACGGCGCCGAGAGGGCGGAGA
Probe for Locus	BaH50N19
Locus	k09384
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = 1-aminocyclopropane-1-carboxylate oxidase (EC 1.4.3.-) ACO1 [similarity] - sorghum
Type	PCR
PCR primers	Left 5' - ACACCAGGAGCAAACAAACC Right 5' - TCCTCCGAGCAGAAGACTGT
Sequence	BJ551424
PCR size	370