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GrainGenes Marker Report: k09402

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Locus	k09402
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 288.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH15P22
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = TGGGGGCACCRACCTTTCGGA Parent 1 SNP sequence = TGGGGGCACCGACCTTTCGGA Parent 2 SNP sequence = TGGGGGCACCAACCTTTCGGA
Probe for Locus	BaH15P22
Locus	k09402
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0007F06.9 [Oryza sativa (japonica cultivar-group)] dbj BAB84370.1 P0007F06.9 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CAAAGCACCCCAGGTAAGAG Right 5' - GTGGTGTATGGGGAACCAAC
Sequence	BQ665438
PCR size	366