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GrainGenes Marker Report: k09407

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Locus
k09407
Type
SNP
Chromosome
2H
Map
Hv-HNxH602-2H126.4
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare
Hordeum vulgare subsp. spontaneum
Probe
BaH37G17
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
SNP = A/G
SNP structure (UNICODE) = AAAATTGGACRAGGTTCTCTA
Parent 1 SNP sequence = AAAATTGGACAAGGTTCTCTA
Parent 2 SNP sequence = AAAATTGGACGAGGTTCTCTA



Probe for Locus
BaH37G17
Locus
k09407
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks
Best BLAST Hit = OSJNBa0006B20.18 [Oryza sativa (japonica cultivar-group)]
Type
PCR
PCR primers
Left 5' - CAAGCAAACAGCCCTTCTTC
Right 5' - TGATCCAACCTCCTACTCCG
Sequence
AV947034
PCR size
370