Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k09448

[Submit comment/correction]

Locus	k09448
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 131.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH30B05
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = CATGCTTCCGYTCAGATAATG Parent 1 SNP sequence = CATGCTTCCGCTCAGATAATG Parent 2 SNP sequence = CATGCTTCCGTTCAGATAATG
Probe for Locus	BaH30B05
Locus	k09448
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative nucleic acid binding protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CGTGTACACTTCCCTCGTTG Right 5' - GGGTACCTCCAGAGGGTGTT
Sequence	AV946115
PCR size	365