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GrainGenes Marker Report: k09449

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Locus	k09449
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 200.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH56P16
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = AACTGAAAACYCCAGCCTTCC Parent 1 SNP sequence = AACTGAAAACTCCAGCCTTCC Parent 2 SNP sequence = AACTGAAAACCCCAGCCTTCC
Probe for Locus	BaH56P16
Locus	k09449
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative kinase interacting protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CTGTACCTCGCCGTGTATGA Right 5' - AGGATGTGCTCATGGAAACC
Sequence	BJ484963
PCR size	365