Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k09496

[Submit comment/correction]

Locus	k09496
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 15.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaSD15P22
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/G SNP structure (UNICODE) = ACAGGTGCTCSATCGACTCAC Parent 1 SNP sequence = ACAGGTGCTCCATCGACTCAC Parent 2 SNP sequence = ACAGGTGCTCGATCGACTCAC
Probe for Locus	BaSD15P22
Locus	k09496
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = VEF family protein [Zea mays]
Type	PCR
PCR primers	Left 5' - TCGCCAACATGCAAAATCTA Right 5' - TCAAGGTTAGCAGGAGACCG
Sequence	AV836888
PCR size	393