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GrainGenes Marker Report: k09571

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Locus	k09571
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 178.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaSD15D05
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = TTTTTGACCCYGCACTCTCCT Parent 1 SNP sequence = TTTTTGACCCTGCACTCTCCT Parent 2 SNP sequence = TTTTTGACCCCGCACTCTCCT
Probe for Locus	BaSD15D05
Locus	k09571
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0529E05.11 [Oryza sativa (japonica cultivar-group)] dbj BAB84395.1 P0529E05.11 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TTAAATGGCATTGCAGTGGA Right 5' - GATTGGTAGGTGCTGGAAGC
Sequence	BJ550048
PCR size	377