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GrainGenes Marker Report: k09849

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Locus	k09849
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 27.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaSD15L22
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = ACGCCTTCTTYCTCATGCTCT Parent 1 SNP sequence = ACGCCTTCTTCCTCATGCTCT Parent 2 SNP sequence = ACGCCTTCTTTCTCATGCTCT
Probe for Locus	BaSD15L22
Locus	k09849
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0443D08.8 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TACCTCCACTAGGCATGCAA Right 5' - GGGAAGAGCATTCCTGATGA
Sequence	AV836884
PCR size	359