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GrainGenes Marker Report: k09859

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Locus	k09859
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 80.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaSD26D07
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/G SNP structure (UNICODE) = TCAGTGAGCTKTTTATGCCTT Parent 1 SNP sequence = TCAGTGAGCTTTTTATGCCTT Parent 2 SNP sequence = TCAGTGAGCTGTTTATGCCTT
Probe for Locus	BaSD26D07
Locus	k09859
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = Ribulose bisphosphate carboxylase small chain, chloroplast precursor (RuBisCO small subunit)
Type	PCR
PCR primers	Left 5' - CGACATACACGGTCCAAATG Right 5' - GTATATTGCAGCGTCGCAGA
Sequence	AV931790
PCR size	355