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GrainGenes Marker Report: k09888

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Locus	k09888
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 139.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaSD1N02
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = TGGCGGACGCRCCGTCGCGCA Parent 1 SNP sequence = TGGCGGACGCGCCGTCGCGCA Parent 2 SNP sequence = TGGCGGACGCACCGTCGCGCA
Probe for Locus	BaSD1N02
Locus	k09888
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = membrane lipoprotein lipid attachment site-containing protein -like [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CACCAGATCGAGAGACACACA Right 5' - CATGCACGCGTAGTGCTAGT
Sequence	AV927383
PCR size	363