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GrainGenes Marker Report: k10043

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Locus	k10043
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 118.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bast70D0107
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/G SNP structure (UNICODE) = TAATAATGTTSAACTTCAATA Parent 1 SNP sequence = TAATAATGTTCAACTTCAATA Parent 2 SNP sequence = TAATAATGTTGAACTTCAATA
Probe for Locus	bast70D0107
Locus	k10043
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = Ornithine carbamoyltransferase, chloroplast precursor (OTCase) (Ornithine transcarbamylase)
Type	PCR
PCR primers	Left 5' - CAGGATTCAGGGACGTGTTT Right 5' - ATATGCAACTCGGAAGGCAG
Sequence	BQ756828
PCR size	198