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GrainGenes Marker Report: k10049

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Locus	k10049
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 125.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bast52G0414
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/A SNP structure (UNICODE) = AATCGTAATGMAGCACGGATG Parent 1 SNP sequence = AATCGTAATGCAGCACGGATG Parent 2 SNP sequence = AATCGTAATGAAGCACGGATG
Probe for Locus	bast52G0414
Locus	k10049
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0690B02.4 [Oryza sativa (japonica cultivar-group)] dbj BAB84416.1 P0690B02.4 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - GCTCCATTGCTTTCGTCTTC Right 5' - ATCCAAGAACTTGTGACCGC
Sequence	BU991896
PCR size	181