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GrainGenes Marker Report: k10062

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Locus	k10062
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 40.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bast78A0202
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = GCGCTCTCCCRGAGCTCCAGC Parent 1 SNP sequence = GCGCTCTCCCGGAGCTCCAGC Parent 2 SNP sequence = GCGCTCTCCCAGAGCTCCAGC
Probe for Locus	bast78A0202
Locus	k10062
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBb0026L04.11 [Oryza sativa (japonica cultivar-group)] emb CAE04701.2 OSJNBa0041M06.3 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TGCTTTCTACCACGAGCAAA Right 5' - AGCTCACTGCTTCGGAAAAC
Sequence	BJ467287
PCR size	184