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GrainGenes Marker Report: k10100

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Locus	k10100
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 270.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bast70C0905
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/G SNP structure (UNICODE) = AGATAGATTGSGGGGTTACAG Parent 1 SNP sequence = AGATAGATTGCGGGGTTACAG Parent 2 SNP sequence = AGATAGATTGGGGGGTTACAG
Probe for Locus	bast70C0905
Locus	k10100
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative 5'-phosphoribosyl-5-aminoimidazole synthetase [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TCAGCAGCATACACATGCAA Right 5' - GACCGGAATGACAGAGGAGA
Sequence	BQ664831
PCR size	191