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GrainGenes Marker Report: k10200

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Locus	k10200
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 32.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bast52E0109
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = TGACGCTTGAYAGCTCATCAT Parent 1 SNP sequence = TGACGCTTGATAGCTCATCAT Parent 2 SNP sequence = TGACGCTTGACAGCTCATCAT
Probe for Locus	bast52E0109
Locus	k10200
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = protein F15H18.4 [imported] - Arabidopsis thaliana gb AAF26001.1 F15H18.4 [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - CAAAGTTTTCAGTGCCCCAT Right 5' - ATCGAGGTACAACTGGGTGG
Sequence	AJ462865
PCR size	254