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GrainGenes Marker Report: k10242

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Locus	k10242
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 67.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bast22B0204
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = CTTCGTTGCCRGCCGGCCAGC Parent 1 SNP sequence = CTTCGTTGCCGGCCGGCCAGC Parent 2 SNP sequence = CTTCGTTGCCAGCCGGCCAGC
Probe for Locus	bast22B0204
Locus	k10242
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative transcription activator [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TACCACGGACAGAAAGGACC Right 5' - CCTCACAGTGGCAATCAATG
Sequence	BQ660402
PCR size	278