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GrainGenes Marker Report: k10394

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Locus	k10394
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 133.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bast72E0109
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/T SNP structure (UNICODE) = TTTTTTTTTTWTTTTTTTTTT Parent 1 SNP sequence = TTTTTTTTTTATTTTTTTTTT Parent 2 SNP sequence = TTTTTTTTTTTTTTTTTTTTT
Probe for Locus	bast72E0109
Locus	k10394
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = remorin-like protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CACACACCGGACTTATTCCC Right 5' - GTCGACATCGACCATCTCCT
Sequence	BJ467080
PCR size	155