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GrainGenes Marker Report: k10497

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Locus	k10497
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 284.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bast03D0408
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = AAGCAGATTCYTTCATTAGCC Parent 1 SNP sequence = AAGCAGATTCCTTCATTAGCC Parent 2 SNP sequence = AAGCAGATTCTTTCATTAGCC
Probe for Locus	bast03D0408
Locus	k10497
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = hypothetical protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - ATGCATCCAGGAAACCAGAA Right 5' - AAGACGAAGGTGTGCTCGAT
Sequence	BI777476
PCR size	264