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GrainGenes Marker Report: k10817

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Locus	k10817
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 75.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bastl38A0501
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/G SNP structure (UNICODE) = CAGCCAAAGCRCAGCTCACCA Parent 1 SNP sequence = CAGCCAAAGCACAGCTCACCA Parent 2 SNP sequence = CAGCCAAAGCGCAGCTCACCA
Probe for Locus	bastl38A0501
Locus	k10817
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = hypothetical protein At2g40980 [imported] - Arabidopsis thaliana gb AAN72059.1 unknown protein [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - GCACAAAAATTCTGCTGGGT Right 5' - CCGATGGTTTCAATCTGCTT
Sequence	BU995194
PCR size	357