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GrainGenes Marker Report: k10841

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Locus	k10841
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 136
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bastl41G0513
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/C SNP structure (UNICODE) = ACTTGCTCAGSGAGGAGTGGT Parent 1 SNP sequence = ACTTGCTCAGGGAGGAGTGGT Parent 2 SNP sequence = ACTTGCTCAGCGAGGAGTGGT
Probe for Locus	bastl41G0513
Locus	k10841
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = oligosaccharyl transferase STT3 subunit family protein [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - TTGATCCGACAACATCGAAA Right 5' - GAGCTGGAATCCCTTCAACA
Sequence	BQ658357
PCR size	357