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GrainGenes Marker Report: k10972

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Locus	k10972
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 84.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	kr14C0305
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/G SNP structure (UNICODE) = GAGACCGGGCSGGATCCGGCC Parent 1 SNP sequence = GAGACCGGGCCGGATCCGGCC Parent 2 SNP sequence = GAGACCGGGCGGGATCCGGCC
Probe for Locus	kr14C0305
Locus	k10972
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative thioredoxin [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - ACAAGAACAAGGCACTTGGC Right 5' - CGGTTATCCGAGATGCTGAT
Sequence	CA005690
PCR size	276