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GrainGenes Marker Report: k11260

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Locus	k11260
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 79.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	kr70G0113
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/- SNP structure (UNICODE) = CTTGTTATTCC/-GAATTGGAAA Parent 1 SNP sequence = CTTGTTATTCCGAATTGGAAA Parent 2 SNP sequence = CTTGTTATTC-GAATTGGAAA
Probe for Locus	kr70G0113
Locus	k11260
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = jakalin homolog - barley gb AAA87041.1 putative 32.6 kDa jasmonate-induced protein [Hordeum vulgare]
Type	PCR
PCR primers	Left 5' - GGCTACCCAAACAGATGGAA Right 5' - AAGTGACCCAGGAATCCTCC
Sequence	BG301183
PCR size	213