Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k11309

[Submit comment/correction]

Locus	k11309
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 91.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	kr15A0402
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = ATAGTAGAAAYGCATGGTCAC Parent 1 SNP sequence = ATAGTAGAAATGCATGGTCAC Parent 2 SNP sequence = ATAGTAGAAACGCATGGTCAC
Probe for Locus	kr15A0402
Locus	k11309
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = DNA-directed RNA polymerase II, putative [Arabidopsis thaliana] gb AAM61374.1 RNA polymerase II subunit (hsRPB10), putative [Arabidopsis
Type	PCR
PCR primers	Left 5' - CCAATCTCCCCACCTTTTCT Right 5' - AAGAAGGTCTTGCTTTCGCA
Sequence	BM368232
PCR size	178