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GrainGenes Marker Report: k11387

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Locus	k11387
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 217.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	kr71B0103
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = CGCGCGTCCTYGCCGGCAAGG Parent 1 SNP sequence = CGCGCGTCCTTGCCGGCAAGG Parent 2 SNP sequence = CGCGCGTCCTCGCCGGCAAGG
Probe for Locus	kr71B0103
Locus	k11387
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0093F12.14 [Oryza sativa (japonica cultivar-group)] emb CAE03940.3 OSJNBa0093F12.14 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CACCCTCCATGATATTTGGG Right 5' - ATCCAACTGCAAGGGATGAG
Sequence	BQ767606
PCR size	360