Query (optional)   in Class  

GrainGenes Marker Report: scind04312a

[Submit comment/correction]

Locus
scind04312a
Type
Indel
Synonym
Other nameSNP3197A
SynonymABC04312_L01R01
Chromosome
4H
Map
Hordeum-Consensus2005-SNP-4H52.164
Hordeum-OWB-OPA2008-4H52.267
Hordeum-OWB-SNP-4H55.48
Hordeum-QTLConsensus-Abiotic-4H52.16
Hordeum-QTLConsensus-Agronomic-4H52.16
[ Show Nearby Loci ]
Map Data
Barley, Abiotic QTL Consensus
Barley, Agronomic QTL Consensus
Barley, Consensus 2005, SNP
Barley, OWB, OPA2008
Barley, OWB, SNP
Probe
ABC04312_L01R01
Reference
ReferenceSzucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Russell, Joanne



Probe for Locus
ABC04312_L01R01
Locus
scind04312b
scind04312a
Data at Germinate
ABC04312
Data at PLEXdb
Barley1_04312
General Remarks
Estimated product size = 183
BarleySNP type = EST Indel
Technology platform used = Radioisotope Labelled PCR Separation
Affymetrix contig name = abc04312
Type
STS
PCR primers
5' CCTCCATGAAACCCTTCCTT
5' GTGGAGTGGGTCCTCAAGAA
Sequence
Barley1_04312
Source Species
Hordeum vulgare