Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: scsnp00940

[Submit comment/correction]

Locus	scsnp00940
Type	SNP
Synonym	Other name SNP824 Synonym ABC00940_L01R01
Chromosome	3H
Map	Hordeum-Consensus2005-SNP-3H 103.345 Hordeum-OWB-OPA2008-3H 134.924 Hordeum-OWB-SNP-3H 147.12 Hordeum-QTLConsensus-Abiotic-3H 103.34 Hordeum-QTLConsensus-Agronomic-3H 103.34
	[ Show Nearby Loci ]
Map Data	Barley, Abiotic QTL Consensus Barley, Agronomic QTL Consensus Barley, Consensus 2005, SNP Barley, OWB, OPA2008 Barley, OWB, SNP
Probe	ABC00940_L01R01
Reference	Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Russell, Joanne
Probe for Locus	ABC00940_L01R01
Locus	scsnp00940
Data at Germinate	ABC00940
Data at PLEXdb	Barley1_00940
General Remarks	Estimated product size = 181 BarleySNP type = SNP From EST Technology platform used = PyrosequencingTM Technology Affymetrix contig name = abc00940
Type	STS
PCR primers	5' GAGGTTCGATATCCGAAGGA 5' ACCCTCGGCACTTACAAGG
Sequence	Barley1_00940
Source Species	Hordeum vulgare