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GrainGenes Marker Report: scsnp01216

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Locus
scsnp01216
Type
SNP
Synonym
Other nameSNP1993
SynonymABC01216_L02R02
Chromosome
2H
Map
Hordeum-Consensus2005-SNP-2H29.041
Hordeum-LiHs-SNP-2H19.03
Hordeum-OWB-SNP-2H25.61
Hordeum-QTLConsensus-Abiotic-2H29.04
Hordeum-QTLConsensus-Agronomic-2H29.04
[ Show Nearby Loci ]
Map Data
Barley, Abiotic QTL Consensus
Barley, Agronomic QTL Consensus
Barley, Consensus 2005, SNP
Barley, Lina x H.spont, SNP
Barley, OWB, SNP
Probe
ABC01216_L02R02
Reference
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Russell, Joanne



Probe for Locus
ABC01216_L02R02
Locus
scsnp01216
Data at Germinate
ABC01216
Data at PLEXdb
Barley1_01216
General Remarks
Estimated product size = 228
BarleySNP type = SNP From EST
Technology platform used = PyrosequencingTM Technology
Affymetrix contig name = abc01216
Type
STS
PCR primers
5' CCCCATCCATCAGACAAGAG
5' ACTGCACCTTGTAGCCGATG
Sequence
Barley1_01216
Source Species
Hordeum vulgare