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GrainGenes Marker Report: scsnp03343

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Locus	scsnp03343
Type	SNP
Synonym	Other name SNP2297 Synonym ABC03343_L02R02
Chromosome	2H
Map	Hordeum-Consensus2005-SNP-2H 80.796 [ Show all 8 ]
	[ Show Nearby Loci ]
Map Data	Barley, Abiotic QTL Consensus [ Show all 8 ]
Species	Hordeum vulgare
Probe	ABC03343_L02R02
Reference	Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Russell, Joanne
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Oregon Wolfe Barleys
Probe for Locus	ABC03343_L02R02
Locus	scsnp03343
Data at Germinate	ABC03343
Data at PLEXdb	Barley1_03343
General Remarks	Estimated product size = 177 BarleySNP type = SNP From EST Technology platform used = PyrosequencingTM Technology Affymetrix contig name = abc03343
Type	STS
PCR primers	5' GAAACTTTGAGGAGGGCACA 5' GACGGTAGCCTGTTCGAGTT
Sequence	Barley1_03343
Source Species	Hordeum vulgare