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GrainGenes Probe Report: BE517711-5B

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE517711-5B
Data at Wheat_SNP
BE517711-5B
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP C>T;T>C;C>G at 22;25;64
SNP C>T;A>C at 387;675
SNP C>T at 387
Reference sequence CTTGTTCTCGAAGCCCAGGACCATTTCAGCCATCTCGTTCATGCTCACCATTTCATCACTTCCCATGTTTACAGGCTCGCAGAAATCAGACTTTGTGAGCCTGAAGGTTGAAAAACAATTCTTTAGCCAGCCATAAAAATTGCTCTTGAACAAAGGAGAGAACTTTATAATTTATTTATTTATGGTAGGATGAGAACGAAGATTCAACGGTTTAACATGATACTCATTAGGAACACACATGCAGTATTTTGATAAGAATAGCCTATACATCACAGAATTTGCAATATTACTTGTGAGTTTCCTAAAAAGTAAATGAAATCACTGCAGCTTTTGGAATAGTTGTGAGATAAAATTGCTTGCTAGGCCATCACAATCAATTAAGAAACTAATCTACCTACATGTGGTTCTCAAATTGCAATTCTGTCGACTGGAAATCAACATCTCATATGAAACTTTCAAGTCTAGAAAGCTAAAACAACTGATGCTTCTCTTGGAAGTCAGAAGTAAAGCTGCAGTCCATCAATTGGCATCTCAGCACAAATTGTCTTATTATCCACACTAAATAGAGCAATTCATGCAAAATTTATTTCATGCTAATATAAGGCATATTTCAGCAACAGCAAAAAAGTAGACATACCAGTACCAGATTTGATAGCGAAAAATAAGAAATACTGGACTATACAAACATAAGTCGGTAAAAAAAATACCTGAGGACACCCTCCACACATTCATCAATAAATGTGAAGGATCTAGTCTGCAGACCAT
Reference sequence ATTTTATCTGGTACTTAGTAGTATCTAGGTTCTTTTTTTTGCGGGGTAATGTGTTCTTTGCTAGCTATTGAAGTTTGACAATTGTTTCGGCTTAGGTGGAAGGGAGAAGGCACCCGCTGCTTTCTGCAGAAAGGCTCTAACCTCCACTGACCGGTTTGAGATGTGGGGAGATGGTCTGCAGACTAGATCCTTCACATTTATTGATGAATGTGTGGAGGGTGTCCTCAGGTATTTTTTTTTACCAACTTATGTTTATATAGTCCAGTATTTCTTACCTTTTGCTATCAAATCCGGTACTGGTATGTCTACTTTTTTGCTTTTGCTGAAATATGCCTTATATTAGCATGAATTGCTCTATTTAGTGTGGATAATAAGACAATTTGTGCCTAGATGACAATTAATGGACTGCAGCTTTAGTTCTGACTTCCAAGGGAAGCATCAATTGTTTTAGCTTCTAGTTTTAAAAGTTTCATATGAAATGTTGATTTCCAGTCGACAGAATTGCAATTTGAGAACCACCTGTTGGTAGATTAGTTTCTTAATTAATTGTGATGGCCCAGCAAGCAATTTTATCTCACAACTATTCCAAAAGCTGCAGTGATTTCATTTCCTTTTTAGGAAACCACAAGTTCTATTGCAAATTCTGTGATGTATAGGCTATTCTTATCAAAATAATGCACATGTGTTCCTAATGAGTATCATGTTAAACCATTGAATCTTCGTTCTCATCCTACCATAAATAAATAAATTATAAAGTTC
Type
EST
SNP
PCR primers
BE517711B_R1 CTCACCATTTCGTCACTCCCA
BE517711_cpF1 GGATTGGTCGCTTTCACAAT
Sequence
NSFT03P2_Contig18196
Linkage Group
5B
Source Species
Triticum aestivum