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GrainGenes Probe Report: BE591974-5D

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE591974-5D
Data at Wheat_SNP
BE591974-5D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP T>G at 293
SNP G>T;DEL;C>T at 327;331;353
SNP A>G at 277
Reference sequence GAAAAGACTGCAGCTGAGGTTCGGGAAAGGCAAGCTGCTGAGGCTCGAGAGAGGCACGCTGCTTCTGCAGCGGCAGCAGCGGCAAGAGAAAAACAGAGTAAACCAGATGACCTTGAGTCCTTTTTTGGTATGGGTGCCCGAGCAAACAGTGCACCTAAGCAAAGGGCTCCAACAGTGGTGATTACAACAATCTTCATGCAATAGTTGTTTTTATGGTAATATTTTGCTAGTGTTTTTCTAATTGTGGAAATTTCAGGATCCTACGTTTAATGCTCAAAGTCAAAGTAGAGCGTCAGCAACCTCTGCTTCAGCATCATCTATGCGGAAGGCATCATCTACAACAAATTTTACGGATGACCTATCCGCATAGATGATGCTGAAGCAGAGGTTGCTGACGCTCTACTTTGACTTTGAGCATTAAACGTA
Reference sequence AGATGCAAAGAGAAGAGCTGACCGAGCAGCAGTGGAAAAGGCTGCAGCTGAGGTTCGGGAAAGGCAAGCTGCTGAGGCTCGAGAGAGGCACGCTGCTTCTGCAGCGGCAGCAGCGGCAAGAGAAAAACAGAGTAAACCAGATGACCTTGAGTCCTTTTTTGGTATGGGTGCCCGAGCAAACAGTGCACCTAAGCAAAGGGCTCCAACAGTGGTGATTACAACAATCTTCATGCAATAGTTGTTTTTATGGTAATATTTTGCTAGTGTTTTTCTAATTGTGGAAATTTCAGGATCCTACGTTTAATGCTCAAAGTCAAAGTAGAGCGGCAGGCAACCTCTGCTTCAGCATCATCTATGCGGAAGGCATCATCTACAACAAATTTTAC
Type
EST
SNP
PCR primers
BE591974_cpR1 GCGGATAGGTCATCCGTAAA
BE591974D_F1 GAGCAGCAGTGGAAAAGACT
Sequence
NSFT03P2_Contig12591
Linkage Group
5D
Source Species
Triticum aestivum