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GrainGenes Probe Report: BF474606-5B

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BF474606-5B
Data at Wheat_SNP
BF474606-5B
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP DEL at 279-290
SNP T>C;C>G;G>C;C>G;C>T at 294;295;296;297;305
Reference sequence GAATTTCATGGAGATGCTTGCCCATGGCCATCATTCTGCAATGTCCCAGGACTCATCGGCAAGGGAGTCGCAGGACATGCTTGCTTCCCACCATGGGCAACGCTCCTTCGGTCATGTGAAAGATATGAAGAATGAGATGTTGATGCATATGATGGATGGAGCACAGAGTGGTGGTGCTGAACTCATCCATGATGATCCCCACAATGGTGCACAGTTCGAGTTTGGTGTCCTGAACAACCATGACTCGTCGGATGTTCCGGTTGGGCAAGGGCAAGGGCAAGGGCAAGGGCTGTCTCTGAGCCTCAACACACAAATCCTCGCGCCGTCCTTGCCATACTGGTCCATCAAACCAGACATGTTGACGCCAAACTCTTACCAGGAAAGCCTTAGAATAGACGACATCCGGATGAAGAACATGCAGTCTGAGGCCTCTCGTGCGATCCGGCACTCGAGGTATCTCAAGGCAGCTCAGGAAAGTGC
Reference sequence TGGCCATGGCCATCATTCTGCAATGTCCCAGGACTCATCGGCAAGGGAGTCGCAGGACATGCTTGCTTCCCACCATGGGCAACGCTCGTTCGGTCATGTGAAAGATATGAAGAATGAGATGTTGATGCATATGATGGATGGAGCACAGAGTGGTGGTGCTGAACTCATCCATGATGATCCCCACAATGGTGCACAGTTCGAGTTTGGTGTCCTGAACAACCATGACTCATCAGATGTTCCGGTAGGGCAAGGGCAAGGGCAAGGGCTGTCTCTGAGCCTCAACACACAAATCCTCGCGCCGTCCCTTGCCATACTGGTCTATCAAACCAGACATGTTGACGCCAAACTCTTACCAGGAAAGCCTTAGAATAGATGACATCCGGATGAAGAACATGCAGTCTGAGGCCTCTCGTGCGATCCGGCACTCAAGGTATCTCAA
Type
EST
SNP
PCR primers
BF474606A_F1 GAATTTCATGGAGATGCTTGC
BF474606_cpR1 GCACTTTCTTGAGCTGCCTT
Sequence
NSFT03P2_Contig7227
Linkage Group
5B
Source Species
Triticum aestivum