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GrainGenes Probe Report: BG274851-3D

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BG274851-3D
Data at Wheat_SNP
BG274851-3D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP C>T;C>T;T>G at 100;110;176
SNP T>G at 176
SNP G>T;C>T;C>T at 9;140;150
Reference sequence CGTCACTGAATGATCCAAAGATAGCTGATGACTCTTTTCTGTTTTTCATTTATTTGTTTGAGTTTTCTCCTCCTCTATCAGTGCAGTTTTTATTCCTAGCAACTGAGAACGCACAATGCACGTTTGCCGGTACAACCATATTCCAATTGCATACATAATAATCATACTATTTTGCTTACGTATAGATTGTAATGATATACTCTTTATAGATTTGCAAAAGTAATAATCCTGACAAATATTTTTATTTTCTGCTTTATCAGATAAGCTTCCCTACTGTATCCGTATTCTTCTAGAATCAGCTGTCCGCAACTAA
Reference sequence TAAGCCTGGGGTGGAGAGTATGGCAAGTTCTACAGCATTCCTGCACTGAATGATCCAAAGATAGGTGATGACTCTTTTCTGTTTTTCATTTATTTGTTTGAGTTTTCTCCTCCTCTATCAGTGCAGTTTTTATTCCTAGCAACTGAGAACGCACAATGCACGTTTGCCGGTACAACCATATTCCAATTGCATACATAATAATCATACTATTTTGCGTACGTATAGATTGTAATGATATACTCTTTATAGATTTGCAAAAGTAATAATCCTGACAAATATTTTTATTTTCTGCTTTATCAGATAAGCTTCCCTACTGTATCCGTATTCTTCTAGAATCAGCTGTCCGCAAC
Type
EST
SNP
PCR primers
BG274851_cpR1 AGTTGCGGACAGCTGATTCT
BG274851D_F2 CACTGAATGATCCAAAGATAGCTG
Sequence
NSFT03P2_Contig8540
Linkage Group
3D
Source Species
Triticum aestivum