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GrainGenes Probe Report: WMC428

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
WMC428  [ Marker Report ]
Locus
Xwmc428-3A
Xwmc428
wmc428-3A
wmc428
Reference
ReferenceSomers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
General Remarks
Wheat Microsatellite Consortium Project 1, Plate reference 24a3
Donor: ITCF
Location from nullisomic/tetrasomic (Daryl Somers, AgCanada, Feb 2001) : 259 bases located on 3A
Trimmed to insert at both ends. Bases 166 to 263 (complement) show homology to 11g10.1 bases 378 to 475 (98 in longest run, maxScore = 86). (CA)25 186 to 235, (CA)4 247 to 254.
Type
PCR
SSR
PCR primers
Forward TTAATccTAgccgTcccTTTTT at 39 length 22 bases, Tm 62
Reverse cgAccTTcgTTggTTATTTgTg at 274 length 22 bases, Tm 63
SSR size
257 bases expected, Chinese Spring
Amplification Conditions
51C anneal, polymorphic on acrylamide.
Sequence
WMC428
Source Species
Triticum aestivum