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GrainGenes Probe Report: WMC534

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
WMC534
Reference
ReferenceSomers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
General Remarks
Wheat Microsatellite Consortium Project 1, Plate reference 26b2
Donor: Madre, Secobra
Trimmed to insert at both ends. Bases 109 to 129 show homology to 14g2 bases 359 to 379 (21 in longest run, maxScore = 23). Primers have no apparent match to 14g2. (GT)23 82 to 127.
Type
PCR
SSR
PCR primers
Forward ggAggATTTcTcTcATAcTggA at 13 length 22 bases, Tm 59
Reverse AgcgTgTTTATgATAgATgggT at 161 length 22 bases, Tm 59
SSR size
170 bases expected, Chinese Spring
Amplification Conditions
51C anneal, polymorphic on acrylamide (130 bases and 210 bases - dominant markers?).
Sequence
WMC534
Source Species
Triticum aestivum