Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: BE399630-5B

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	BE399630-5B
Data at Wheat_SNP	BE399630-5B
Reference	Akhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks	SNP DEL at 122 SNP G>T at 687 Reference sequence TTCGCTGTACTATTCTACCTCAGTATAGCAAGATTAGCTGTTTGCAGTGACTGCTTTTTGTTCAGAAGCAACAAACTCATGGGTTATTTTCTTTCTGGTGCTAATGTGGAAGTTTTAGCTTGAAGATGTACCGACAGGTCTTTTATGTAGTTTAATTATACTTTGGAAAGTTGGTGATTGAAGTAAGCTAGTGATATGCCAGATGCCAAGCTAATTTCTGCAGTTCATTCCTGTTTTCGTGCTATGTATTGATTTTAAAGTATCAAATTGTCACCTCCATCTTACATTATGTATTTTTCCACAAGAAATCAGTATCTGTTTCCAGCTACTCTTCACCATTAATACCTGAACCTACAACTGTATATATTAGTGCTAACAGTATGTATAATACTCCAAAGTTTAGGTTAAAGTTGTAGGTTCAATATGCACATGCAGCGTCATCATTACTACACTGATGGTTAAAGTTTAGGTCAAAGTTATACTTAAAAGTTTAGGCTAAAGTTGTAGGTTCAATATGTACATGTAGGTTCAATATACACTGATGGAGTACTATATACAACTGTATACCAGTGTCATCATGCTTTGATGAACTTCTGTTTTCAGTGTACTTAAAGTTTAGGTTTGGATGCTCATGCAGGCATGCCGCCTTTTGTTTTTTTGCCTTACAAACACTCGTTAATATGTACATAGTTATTGTTTCTCCGTGTAGACTGTTCAATATGTTTTGGTGTTCCATAAATCTCTAACTGTCTTTGCTCTTTCAGCTTAAAGAGCTTGAGAAGATGGGTCCTAAAAAA Reference sequence CCTCCAGGAAAGAGACCCATCTTCTCAAGCTCTTTAAGCTGAAAGAGCAAAGACAGTTAGAGATTTATGGAACACCAAAACATATTGAACAGTCTACACGGAGAAACAATAACTATGTACATATTAACGAGTGTTTGTAAGGAAAAAAAAACAAAAGGCGGCATGCCTGCATGAGCATCCAAACCTAAACTTTAAGTACACTGAAAACAGAAGTTCATCAAAGCACGATGACACTGGTATACAGTTGTATATAGTACTCCATCAGTGTATATTGAACCTACAACTTTAGCCTAAACTAAGTATAACTTTGACCTAAACTTTAACCATCAGTGTAGTAATGATGACGCTGCATGTGCATATTGAACCTACAGCTTTAACCTAAACTTTGGAGTATTATACATACTGTTAGCACTAATATATACAGTTGTAGGTTCAGGTATTAATGGTGAAGAGTAGCTGGAAACAGATACTGATTTCTTGTGGAAAAATACATAATGTAAGATGGAGGTGACAATTTGATAGTTTAAAATCAATACATAGCGCGAAAACAGGAATGAACTGCAGAAATTAGCTTGGCATCTGGCATATCACTAGCTTACTTCAATCACCAACTTTCCAAAGTAAAATTAAACTACATAAAAGACCTGTTGGTACATCTTCAAGCTAAAACTTCCACATTAGCACCAGAAAGAAAATAACCCATGAGTTTGTTGCTTCTGAACAAAAAGCAGTCACTGCAAACAGCTAATCTTGCTATACTGAGGTAGAATAGTATAACGAAATCTCCACAGAAGATCTTACCAGATAGAAGTCTTGACTCTCGT
Type	EST SNP
PCR primers	BE399630B_F2 ATCTTCTGTGGAGATTTCGCTG BE399630_cpR1 AAGATCATCATCCACCAGGC
Sequence	NSFT03P2_Contig9745
Linkage Group	5B
Source Species	Triticum aestivum