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GrainGenes Probe Report: BE443187-5D

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE443187-5D
Data at Wheat_SNP
BE443187-5D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP G>A;T>C;A>G at 104;360;637
SNP T>C at 238
Reference sequence TGAAGAATATAACCAGGTAGTTTTAAGCCCATTTGCTTTGGAATTACAATGCTCAAATTCTGAGCATAGCATGTGCACTTGTTGCACAGACTAACCTGCCCCCGCATGCCTTTTCTAGATAATTCTGTGGTTCCCTAAATCATGAAAAATGACACCAAAGCTCTTTTGCAGGACTCGAAGAGGTATAGTTCTGGAAGGGGTGCTCATGTAAACCTTAGAAGGGCGGAAAAGGCACGGATTTTGGTCACTAAAATTCCAGGTAGGTTTTGATGCTGGAGACTATCGTGTATTTCAGTTTAGTTCAATGAGTGACCCATATCTTTCTCAGCTATGATGGACAACCTGATAAACCGTACCTTTGCTTGGGAAAATGCAAGAAATAAGCCATTCTTATATGATGGGGTATGTCTACAATCTGATCAGTAGGGTAAGCATTTATCATTTGTTTCTTTAATTAATTGACTCGTATATATGATTTGACAGGGACGACTAGTATCTGTTCTAGAAGAGTACAGACTTAACAGAAAACAAAAGGAAGAGGAAAAACGGCGATACCGGGTTAGTGATTGTTTACCAAATCACCATTATTGGCTGAAAAATAATATGGCATATTCTGGTCTGAACATCACTTTCTTTATTTGCAGGATCAGAAGAAATTGGAGAGCATCCTACTTGCAGAGAAAGAAGCGATTTTTGGCTCCAAACCAAGCCCAAAGAGAGC
Reference sequence TTCTGTGGTTCCCTAAATCATGAAAAATGACACCAAAGCTCTTTTGCAGGACTCGAAGAGGTATAGTTCTGGAAGGGGTGCTCATGTAAACCTTAGAAGGGCGGAAAAGGCACGGATTTTGGTCACTAAAATTCCAGGTAGGTTTTGATGCTGGAGACTATCGTGTATTTCAGTTTAGTTCAATGAGTGACCCATATCTTTCTCAGCTATGATGGACAACCTGATAAACCGTACCTTTGCTTGGGAAAATGCAAGAAATAAGCCATTCTTATATGATGGGGTATGTCTACAATCTGATCAGTAGGGTAAGCATTTATCATTTGTTTCTTTAATTAATTGACTCGTATATATGATTTGACAGGGACGACTAGTATCTGTTCTAGAAGAGTACAGACTTAACAGAAAACAAAAGGAAGAGGAAAAACGGCGATACCGGGTTAGTGATTGTTTACCAAATCACCATTATTGGCTGAAAAATAATATGGCATATTCTGGTCTGAACATCACTTTCTTTATTTGCAGGATCAGAAGAAATTGGAGAGCATCCTACTTGCAGAGAAAGAAGCGATTTTTGGCTCCAAACCAAGCCCAAAGAGAGCGAGCA
Type
EST
SNP
PCR primers
BE443187_cpR1 CTGGTTAAGCTGCTCGCTCT
BE443187D_F1 AGCATGTGCACTTGTTGCTCA
Sequence
NSFT03P2_Contig14293
Linkage Group
5D
Source Species
Triticum aestivum