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GrainGenes Probe Report: BE443745-5A

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE443745-5A
Data at Wheat_SNP
BE443745-5A
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP G>A;T>C at 88;130
SNP INS;DEL;G>T at 19, 1;93;178
SNP G>A;A>C;T>C at 88;129;130
Reference sequence GCAAATTATGTATCTCCAATCAGGATGCTTAAATGACCCACTAATTAAAGCAATAGCTCAAAGTACAACATAGGATCACTGCTAAGTAAAAAATTCAAGGTGCCAAACCAATTCAACACTTTATCCAGAGACAAATTTAAGCCCAAGCACTAACTGATAATTATTATCTATTGCTTGGGCTAGGAGTGGAGG
Reference sequence TACTAAATCGTGCGCTATCAAATTTGGAAGTGCAAGCTTTTTCAACTTTGAGAAGCTGCTCTTTGACAACATTACTATAGTTGATTCGCATCGAGGACTTGGAATGCAGATCCGTGATGGAGGTATTGATTTTTTTGCTTCCAATTGTCAATGAACTGTCATACTATCAGGCGGCATAACTGAATATCTTATTAAAGAAAACTGCTATGTTGATTGCCACTTTGAGGCATTGGGGGGTGGG
Type
EST
SNP
PCR primers
BE443745_cpF1 CAATCTGCCCGAAGTCTAGC
BE443745_cpF1 CGATCTGCCCAAAGTCTAGC
Sequence
NSFT03P2_Contig13212
Linkage Group
5A
Source Species
Triticum aestivum