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GrainGenes QTL Report: QUt.spa-7A.2

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QTL	QUt.spa-7A.2
Trait Affected	Reaction to smut
Synonym	QTL1478_7A-Kumar_et_al._2018
Ontology	CO_321:0000921 Planteome wheat loose smut incidence trait
Trait Study	Smut resistance, Blackbird x Strongfield, Kumar2018
Chromosome	7A
Positive Significant Marker	IWB34936-7A IWA8492 Tdurum_contig67992_182
LOD Peak Location	Tdurum_contig67992_182
Phenotypic R2	8
Species	Triticum turgidum ssp. durum Triticum turgidum ssp. carthlicum
Parent	Blackbird Strongfield
Comment	Curator Note (3/2019)The name 'spa' was from the paper's QTL name; but without definition of its origen. QUt.spa-7A.1 was in the paper, but did not translate to the durum assembly. 7A.2 was used to maintain consistency with the original publication. Curator Note (VCB, 04/2019). QTL names and markers associated with this QTL are from two sources, the primary reference and information embedded in the QTL track of the GrainGenes genome browser for the Triticum turgidum ssp. durum cv. Svevo (RefSeq 1.0) assembly. QTL were initially curated by members of the International Durum Genome Sequencing Consortium who assigned the encoded QTL name and information on the assembly including computationally-aligned significant markers (SNPs, DArTs, SSRs). To curate this QTL for GrainGenes, the primary reference was reviewed, the original QTL name was synonymized, and original markers were added to the significant marker list shown on the QTL report page. GrainGenes users are advised to review the qtl track in the Svevo assembly for additional position information and confidence intervals, as well as the primary reference for additional statistics.
Reference	Kumar S et al. (2017) High-density genetic mapping of a major QTL for resistance to multiple races of loose smut in a tetraploid wheat cross PLoS One 13:e019226.

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