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GrainGenes Sequence Report: CD373431

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Sequence	CD373431
Contig	NSFT03P2_Contig9981
External Databases	Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index	TC311429
wEST map position	CD373431
NCBI UniGene	Ta.45463
DB Remark	Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, strongly similar to NP_001052309.1 Os04g0249500 [Oryza sativa (japonica cultivar-group)]'
Keyword	EST
Species	Triticum aestivum
Cultivar	Chinese Spring
Chromosome	2AS 2BS 2DS
Clone Library	CS wheat unstressed etiolated seedling shoot cDNA library
Tissue	Shoot; etiolated
Developmental Stage	Five day old seedling
Data Source	genbank Release 136, Jun 15 2003 genbank Updated Nov 2006
Title	WHE0326_D08_G16ZT CS wheat unstressed etiolated seedling shoot cDNA library Triticum aestivum cDNA clone WHE0326_D08_G16, mRNA sequence.
Strain	lab_host E. coli SOLR
Clone	WHE0326_D08_G16
Probe	WHE0326_D08_G16
Remark	DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; This EST was generated by sequencing from the 3' end of the clone.; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20.; Seq primer: T7 primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Seeds were surface-sterilized , germinated and grown aseptically in the dark at room temperature on filter paper with water, nystatin and cefotaxime in covered crystallization dishes. Shoots were harvested. The tissue, total RNA, and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors). Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Seeds were surface-sterilized, germinated and grown aseptically in the dark at room temperature on filter paper with water, nystatin and cefotaxime in covered crystallization dishes. Shoots were harvested. The tissue, total RNA, and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA	ttttttttttttttttttttttttttttaataacagttgttgccatgggc agttttgatctttgttacatgtttccaaacaacaaccgatgcaataaaga tccacacaccacaagtacacaaatcccacaccaatcacgtcacactatgt caccaatggaatgaatcgagctgcgagcatcttgctccagagtacaatca tagttcatctgtagccgttctgttcatacgtcggcggcttcggcccgagc aggctggtcatcatcctttggacccgaccctgcggctttctttctctcgg ccttgccacgatctggttacgctccgccgccgcccctgtcgtggtcgcgg gtcttggaggctgctcccctactctggggacggtcttcaccaggttcctg aactgaaggttgtagaacatctgcatgtagcgttgcttggccactctctc ttccttgttcagagtcctccagaagccatacattgaccccatgttcagca ccttggttgcatagatcttccatgtgtagcattcgtagatgcgctgaagc ccggcagtggacatcttgttccagtagcctgggtcttccttgcacttctg gaagaagtctgcaatcttggtgcctgcctccctgccgttcattgggttta tgtggaaacccgacaccccgtcgacgatga

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